Seqera
Seqera Platform is an intuitive, centralized command post that enables data analysis at scale, allowing users to launch, manage, and monitor scalable Nextflow pipelines and compute environments on-premises or across cloud providers.
14 actions Integration catalog
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01 · WHAT THE AGENT CAN DO
Actions
Every capability is a discrete, logged action the agent calls by name — scoped to what you authorize and recorded in the run trace.
Create Wave ContainerSEQERA_CREATE_WAVE_CONTAINER
Tool to submit a request to Wave for accessing a private container registry or building a container image on-the-fly. Use when you need to provision containers via Wave with Dockerfile, Conda recipe, or package specifications. Returns the name of the container made available by Wave.
Get Organization DetailsSEQERA_GET_ORGANIZATION_DETAILS
Tool to retrieve detailed information about a specific organization.
Get Service InfoSEQERA_GET_SERVICE_INFO
Tool to retrieve information about the Seqera API service. Use when you need to check the service version and commit ID for troubleshooting.
Get User InfoSEQERA_GET_USER_INFO
Tool to retrieve information about the authenticated user. Use when you need to fetch details of the current user after authentication.
Get Wave Build LogsSEQERA_GET_WAVE_BUILD_LOGS
Tool to get logs for a container build by build ID. Use when you need to troubleshoot or inspect the build process of a Wave container.
Get Wave Build StatusSEQERA_GET_WAVE_BUILD_STATUS
Tool to retrieve the status of a Wave container build by build ID. Use when you need to check if a container build is completed and whether it succeeded.
Inspect Wave ContainerSEQERA_INSPECT_WAVE_CONTAINER
Tool to inspect container image metadata via Wave. Use when you need registry, manifest, digest, configuration, and OCI compatibility information about a container image.
List Action Event TypesSEQERA_LIST_ACTION_EVENT_TYPES
Tool to list supported action event types. Use when you need to discover available triggers for pipelines, optionally filtered by workspace.
List Compute EnvironmentsSEQERA_LIST_COMPUTE_ENVIRONMENTS
Tool to retrieve a list of compute environments. Use when you need to page, sort, or filter compute environments accessible to your account.
List OrganizationsSEQERA_LIST_ORGANIZATIONS
Tool to list all organizations. Use after authentication to retrieve accessible Seqera organizations.
List PipelinesSEQERA_LIST_PIPELINES
Tool to list all pipelines accessible to the authenticated user. Use when you need to browse pipelines with optional pagination, sorting, or search filters.
List WorkflowsSEQERA_LIST_WORKFLOWS
Tool to list workflows. Use when you need to retrieve workflows filtered by workspace and paginated.
Validate Action NameSEQERA_VALIDATE_ACTION_NAME
Tool to validate action name. Use when you need to confirm if an action name is valid and available before creating an action. Returns validation status with details.
Validate Pipeline NameSEQERA_VALIDATE_PIPELINE_NAME
Tool to validate a pipeline name. Use when you need to check if a given pipeline name is valid and available before creating or updating one.
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